Everything about Bioinformatics
Computational analysis of large, complex sets of biological data
Bioinformatics is an interdisciplinary field of science that develops computational methods and software tools for understanding biological data, especially when the data sets are large and complex. Bioinformatics integrates principles from biology, chemistry, physics, computer science, data science, computer programming, information engineering, mathematics, and statistics to analyze and interpret biological data. This process can sometimes be referred to as computational biology; however, the distinction between the two terms is often disputed. The term computational biology can refer to building and using models of biological systems. Wikipedia →
🧭 Start here: a 6-step reading path
- Read the overview: BioinformaticsA 5-minute orientation
- Skim a recent paper: Introducing the Bacterial and Viral Bioinformatics Resource Center (BV-BRC): a resource combining PATRIC, IRD and ViPRInfluential work since 2022
- Pick up a classic book: Advances in visual computingThe most-reprinted book on the subject
- Read the landmark paper: Systematic and integrative analysis of large gene lists using DAVID bioinformatics resourcesCited 32,433 times
- Go sideways: Sequence analysisA closely related topic
- Go sideways: GenomicsA closely related topic
📖 Definitions
Noun A field of science in which biology, computer science, and information technology merge into a single discipline to analyse biological information using computers and statistical techniques.
🏆 Landmark papers (most cited)
Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists
Bioconductor: open software development for computational biology and bioinformatics
Biopython: freely available Python tools for computational molecular biology and bioinformatics
The nf-core framework for community-curated bioinformatics pipelines
A review of feature selection techniques in bioinformatics
TBtools-II: A “one for all, all for one” bioinformatics platform for biological big-data mining
Unipro UGENE: a unified bioinformatics toolkit
🆕 Influential since 2022
Introducing the Bacterial and Viral Bioinformatics Resource Center (BV-BRC): a resource combining PATRIC, IRD and ViPR
Sangerbox: A comprehensive, interaction‐friendly clinical bioinformatics analysis platform
Guide to Metabolomics Analysis: A Bioinformatics Workflow
OmicStudio: A composable bioinformatics cloud platform with real‐time feedback that can generate high‐quality graphs for publication
VEuPathDB: the eukaryotic pathogen, vector and host bioinformatics resource center in 2023
📚 Books worth reading
Advances in visual computingGeorge Bebis, Richard Boyle · 2005
Bioinformatics and Biomedical EngineeringIgnacio Rojas, Francisco Ortuño · 2015
Advances in Computational IntelligenceIgnacio Rojas · 2013
Intelligent Computing Theories and ApplicationDe-Shuang Huang, Kang-Hyun Jo · 2016
Think PythonAllen B. Downey, Allen Downey · 2009
Molecular Biology of the GeneJames D. Watson, Tania A. Baker · 2004
Bioinformatics for dummiesJean-Michel Claverie · 2003- 📕Algorithms in bioinformaticsWing-Kin Sung · 2009
Ranked by number of editions on Open Library, a rough measure of how lasting a book is.
🔗 Related topics
- Sequence analysis In bioinformatics, sequence analysis is the process of subjecting a DNA, RNA or peptide sequence to any of a wide range of analytical methods to understand…
- Genomics Genomics is an interdisciplinary field of molecular biology focusing on the structure, function, evolution, mapping, and editing of genomes. A genome is…
- Sequence database In the field of bioinformatics, a sequence database is a type of biological database that is composed of a large collection of computerized ("digital")…
- Computational biology Computational biology is a interdisciplinary field involving the study of biological systems through the application of computer science, data analysis…
- Computational genomics Computational genomics refers to the use of computational and statistical analysis to decipher biology from genome sequences and related data, including…
- Gene prediction In computational biology, gene prediction or gene finding refers to the process of identifying the regions of genomic DNA that encode genes. This includes…
- DNA annotation In molecular biology and genetics, DNA annotation or genome annotation is the process of describing the structure and function of the components of a genome…
- Genome browser The completion of the human genome sequencing in the early 2000s was a turning point in genomics research. Scientists have conducted series of research…