Everything about PDBsum

🧭 Start here: a 6-step reading path

1. Read the overview: PDBsumA 5-minute orientation
2. Read the landmark paper: PDBsum: Structural summaries of PDB entriesCited 1,816 times
3. Go sideways: Protein Data BankA closely related topic
4. Go sideways: Protein structure databaseA closely related topic

🏆 Landmark papers (most cited)

• PDBsum: Structural summaries of PDB entries

  Roman A. Laskowski, Jagoda Jabłońska, Lukáš Pravda · 2017 · Protein Science · 1,816 citations

• PDBsum: summaries and analyses of PDB structures

  R. A. Laskowski · 2001 · Nucleic Acids Research · 732 citations

• PDBsum new things

  R. A. Laskowski · 2009 · Nucleic Acids Research · 539 citations

• PDBsum: a web-based database of summaries and analyses of all PDB structures

  Roman A. Laskowski, E.Gail Hutchinson, Alex D. Michie · 1997 · Trends in Biochemical Sciences · 532 citations

• PDBsum more: new summaries and analyses of the known 3D structures of proteins and nucleic acids

  R. A. Laskowski · 2004 · Nucleic Acids Research · 331 citations

• PDBsum additions

  Tjaart A. P. de Beer, Karel Berka, Janet M. Thornton · 2013 · Nucleic Acids Research · 299 citations

• PDBsum 1 : A standalone program for generating PDBsum analyses

  Roman A. Laskowski · 2022 · Protein Science · 122 citations

• PDBsum extras: SARS‐CoV‐2 and AlphaFold models

  Roman A. Laskowski, Janet M. Thornton · 2021 · Protein Science · 116 citations

📚 Books worth reading

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🔗 Related topics

• Protein Data Bank The Protein Data Bank (PDB) is a database for the three-dimensional structural data of large biological molecules such as proteins and nucleic acids, which…
• Protein structure database In biology, a protein structure database is a database that is modeled around the various experimentally determined protein structures. The aim of most…
• List of biological databases Biological databases are stores of biological information. The journal Nucleic Acids Research regularly publishes special issues on biological databases…
• Structural alignment software This list of structural comparison and alignment software is a compilation of software tools and web portals used in pairwise or multiple structural comparison…
• BioJava BioJava is an open-source software project dedicated to providing Java tools for processing biological data. BioJava is a set of library functions written…
• Structural bioinformatics Structural bioinformatics is the branch of bioinformatics that is related to the analysis and prediction of the three-dimensional structure of biological…
• Helen M. Berman Helen Miriam Berman is an American chemist who is a Distinguished Professor of Quantitative and Computational Biology at the USC Dornsife College of Letters…
• European Bioinformatics Institute The European Bioinformatics Institute (EMBL-EBI) is an intergovernmental organization (IGO) which, as part of the European Molecular Biology Laboratory…