Everything about NeXtProt
neXtProt is an on-line knowledge platform on human proteins. It strives to be a comprehensive resource that provides a variety of types of information on human proteins, such as their function, subcellular location, expression, interactions and role in diseases. The major part of the information in neXtProt is obtained from the UniProt Swiss-Prot database but it is complemented by data originating from high-throughput studies with an emphasis on proteomics. neXtProt offers also an advanced search capacity based on the SPARQL technology as well as an API that allows to programmatically extract the data stored in the resource. It is developed by the CALIPHO group directed by Amos Bairoch and Lydie Lane of the Swiss Institute of Bioinformatics (SIB). Wikipedia →
🧠Start here: a 6-step reading path
- Read the overview: NeXtProtA 5-minute orientation
- Read the landmark paper: neXtProt: a knowledge platform for human proteinsCited 184 times
- Go sideways: Amos BairochA closely related topic
- Go sideways: Elisabeth GasteigerA closely related topic
đź“– Definitions
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🗂️ The subject at a glance
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🏆 Landmark papers (most cited)
neXtProt: a knowledge platform for human proteins
The neXtProt knowledgebase on human proteins: 2017 update
Identification of Missing Proteins in the neXtProt Database and Unregistered Phosphopeptides in the PhosphoSitePlus Database As Part of the Chromosome-Centric Human Proteome Project
The neXtProt knowledgebase in 2020: data, tools and usability improvements
neXtProt: Organizing Protein Knowledge in the Context of Human Proteome Projects
The neXtProt knowledgebase on human proteins: current status
The neXtProt peptide uniqueness checker: a tool for the proteomics community
Exploring the Uncharacterized Human Proteome Using neXtProt
đź“š Books worth reading
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đź”— Related topics
- Amos Bairoch Amos Bairoch (22 November 1957 – 29 November 2025) was a Swiss bioinformatician and Professor of Bioinformatics at the Department of Human Protein Sciences…
- Elisabeth Gasteiger Elisabeth Gasteiger is a Swiss bioinformatician known for her work in developing and managing tools for protein analysis. Her efforts have been instrumental…
- Expasy Expasy is an online bioinformatics resource operated by the SIB Swiss Institute of Bioinformatics. It is an extensible and integrative portal which provides…
- UniProt UniProt is a freely accessible database of protein sequence and functional information, many entries being derived from genome sequencing projects. It…
- Swiss Institute of Bioinformatics The SIB Swiss Institute of Bioinformatics is an academic not-for-profit foundation dedicated to biological and biomedical data science which federates…
- Rolf Apweiler Rolf Apweiler is a German bioinformatician who was director and associate director of European Bioinformatics Institute (EBI) part of the European Molecular…
- European Bioinformatics Institute The European Bioinformatics Institute (EMBL-EBI) is an intergovernmental organization (IGO) which, as part of the European Molecular Biology Laboratory…
- PROSITE PROSITE is a protein database. It consists of entries describing the protein families, domains and functional sites as well as amino acid patterns and…