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Everything about Biomedical text mining
Biomedical text analysis to extract relevant information and knowledge
Biomedical text mining refers to the methods and study of how text mining may be applied to texts and literature of the biomedical domain. As a field of research, biomedical text mining incorporates ideas from natural language processing, bioinformatics, medical informatics and computational linguistics. The strategies in this field have been applied to the biomedical literature available through services such as PubMed. Wikipedia →
🧭 Start here: a 6-step reading path
- Read the overview: Biomedical text miningA 5-minute orientation
- Skim a recent paper: An extensive benchmark study on biomedical text generation and mining with ChatGPTInfluential work since 2022
- Pick up a classic book: Mining the biomedical literatureThe most-reprinted book on the subject
- Read the landmark paper: BioBERT: a pre-trained biomedical language representation model for biomedical text miningCited 6,078 times
- Go sideways: Translational bioinformaticsA closely related topic
- Go sideways: BiocurationA closely related topic
📖 Definitions
No dictionary entry for this exact phrase.
🗂️ The subject at a glance
🏆 Landmark papers (most cited)
BioBERT: a pre-trained biomedical language representation model for biomedical text mining
BioGPT: generative pre-trained transformer for biomedical text generation and mining
A survey of current work in biomedical text mining
Biomedical text mining and its applications in cancer research
Frontiers of biomedical text mining: current progress
Text-mining solutions for biomedical research: enabling integrative biology
Application of text mining in the biomedical domain
tmVar: a text mining approach for extracting sequence variants in biomedical literature
🆕 Influential since 2022
An extensive benchmark study on biomedical text generation and mining with ChatGPT
A Review on Electronic Health Record Text-Mining for Biomedical Name Entity Recognition in Healthcare Domain
Advancing Chinese biomedical text mining with community challenges
Topic Modeling Techniques for Text Mining Over a Large-Scale Scientific and Biomedical Text Corpus
A syndrome differentiation model of TCM based on multi-label deep forest using biomedical text mining
📚 Books worth reading
Mining the biomedical literatureHagit Shatkay · 2012
Biomedical informaticsVadim Astakhov · 2009
Computational Intelligence and Decision MakingAna Madureira · 2012- 📕Biomedical Text MiningKalpana Raja · 2022
- 📕Biomedical literature miningVinod D. Kumar, Hannah Jane Tipney · 2014
- 📕Mining Biomedical Text, Images and Visual Features for Information RetrievalSujata Dash, Subhendu Kumar Pani · 2024
Data and Text Processing for Health and Life SciencesFrancisco M Couto · 2019
Bioinformatics methods in clinical researchRune Matthiesen · 2010
Ranked by number of editions on Open Library, a rough measure of how lasting a book is.
🔗 Related topics
- Translational bioinformatics Translational bioinformatics (TBI) is a field that emerged in the 2010s to study health informatics, focused on the convergence of molecular bioinformatics…
- Biocuration Biocuration is the field of life sciences dedicated to organizing biomedical data, information and knowledge into structured formats, such as spreadsheets…
- National Centre for Text Mining The National Centre for Text Mining (NaCTeM) is a publicly funded text mining (TM) centre. It was established to provide support, advice and information…
- Fabio Rinaldi Fabio Rinaldi is head of NLP research at IDSIA, Switzerland. He earned his PhD in Computational Linguistics from the University of Zurich, Switzerland…
- Literature-based discovery Literature-based discovery (LBD), also called literature-related discovery (LRD) is a form of knowledge extraction and automated hypothesis generation…
- Gene–disease database In bioinformatics, a gene–disease database is a systematized collection of data, typically structured to model aspects of reality, in a way to comprehend…
- Lawrence Hunter Lawrence E. Hunter is a professor at the University of Chicago. He was the founder and director of the Computational Bioscience Program at the University…
- Bioinformatics Bioinformatics (/ˌbaɪ.oʊˌɪnfərˈmætɪks/ ) is an interdisciplinary field of science that develops computational methods and software tools for understanding…