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Everything about Webknossos
Open-source software
Webknossos is an open-source software and online platform for viewing, annotating, and sharing large 3D images, primarily used by neuroscientists and cell biologists. It is capable of handling massive volume microscopy datasets, making it a valuable tool in the field of connectomics. Wikipedia →
🧭 Start here: a 6-step reading path
- Read the overview: WebknossosA 5-minute orientation
- Read the landmark paper: webKnossos: efficient online 3D data annotation for connectomicsCited 214 times
- Go sideways: History of microscale connectomicsA closely related topic
- Go sideways: Neuronal tracingA closely related topic
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🗂️ The subject at a glance
🏆 Landmark papers (most cited)
📚 Books worth reading
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🔗 Related topics
- History of microscale connectomics The term connectomics has two meanings. One is the detailed study of individual connections between neurons of the nervous system, or microscale connectomics…
- Neuronal tracing In neuroscience, neuronal tracing or neuron reconstruction refers to the determination of the pathway of the neurites or neuronal processes, the axons…
- Neural circuit reconstruction Neural circuit reconstruction is the reconstruction of the detailed circuitry of the nervous system (or a portion of the nervous system) of an animal.…
- Connectomics Connectomics is the production and study of connectomes, which are comprehensive maps of connections within an organism's nervous system. Study of neuronal…
- Connectome A connectome (/kəˈnɛktoʊm/) is a comprehensive map of neural connections in the brain, and may be thought of as its "wiring diagram". These maps are available…
- Winfried Denk Winfried Denk (born November 12, 1957, in Munich) is a German physicist. He built the first two-photon microscope while he was a graduate student (and…
- Drosophila connectome A Drosophila connectome is a list of neurons in the Drosophila melanogaster (fruit fly) nervous system, and the chemical synapses between them. The fly's…
- Serial block-face scanning electron microscopy Serial block-face scanning electron microscopy is a method to generate high resolution three-dimensional images from small samples. The technique was developed…