Everything about Web 2.0

🧭 Start here: a 6-step reading path

1. Read the overview: Web 2.0A 5-minute orientation
2. Skim a recent paper: DAVID: a web server for functional enrichment analysis and functional annotation of gene lists (2021 update)Influential work since 2022
3. Pick up a classic book: Agenda Setting in a 2. 0 WorldThe most-reprinted book on the subject
4. Read the landmark paper: The SILVA ribosomal RNA gene database project: improved data processing and web-based toolsCited 30,917 times
5. Go sideways: Dynamic web pageA closely related topic
6. Go sideways: World Wide WebA closely related topic

🏆 Landmark papers (most cited)

• The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

  Christian Quast, Elmar Pruesse, Pelin Yilmaz · 2012 · Nucleic Acids Research · 30,917 citations

• Rayyan—a web and mobile app for systematic reviews

  Mourad Ouzzani, Hossam Hammady, Zbys Fedorowicz · 2016 · Systematic Reviews · 23,328 citations

• SwissADME: a free web tool to evaluate pharmacokinetics, drug-likeness and medicinal chemistry friendliness of small molecules

  Antoine Daina, Olivier Michielin, Vincent Zoete · 2017 · Scientific Reports · 17,262 citations

• Mfold web server for nucleic acid folding and hybridization prediction

  M. Zuker · 2003 · Nucleic Acids Research · 12,008 citations

• Enrichr: a comprehensive gene set enrichment analysis web server 2016 update

  Maxim V. Kuleshov, Matthew R. Jones, Andrew D. Rouillard · 2016 · Nucleic Acids Research · 11,106 citations

• CHARMM‐GUI: A web‐based graphical user interface for CHARMM

  Sunhwan Jo, Taehoon Kim, Vidyashankara G. Iyer · 2008 · Journal of Computational Chemistry · 10,070 citations

• The anatomy of a large-scale hypertextual Web search engine

  Sergey Brin, Lawrence Page · 1998 · Computer Networks and ISDN Systems · 9,377 citations

• The Phyre2 web portal for protein modeling, prediction and analysis

  Lawrence A Kelley, Stefans Mezulis, Christopher M Yates · 2015 · Nature Protocols · 9,359 citations

🆕 Influential since 2022

• DAVID: a web server for functional enrichment analysis and functional annotation of gene lists (2021 update)

  Brad T Sherman, Ming Hao, Ju Qiu · 2022 · Nucleic Acids Research · 6,406 citations

• g:Profiler—interoperable web service for functional enrichment analysis and gene identifier mapping (2023 update)

  Liis Kolberg, Uku Raudvere, Ivan Kuzmin · 2023 · Nucleic Acids Research · 2,026 citations

• Tree Visualization By One Table (tvBOT): a web application for visualizing, modifying and annotating phylogenetic trees

  Jianmin Xie, Yuerong Chen, Guanjing Cai · 2023 · Nucleic Acids Research · 1,442 citations

• CellMarker 2.0: an updated database of manually curated cell markers in human/mouse and web tools based on scRNA-seq data

  Congxue Hu, Tengyue Li, Yingqi Xu · 2022 · Nucleic Acids Research · 1,359 citations

• The HADDOCK2.4 web server for integrative modeling of biomolecular complexes

  Rodrigo V. Honorato, Mikael E. Trellet, Brian Jiménez-García · 2024 · Nature Protocols · 710 citations

📚 Books worth reading

• 📕Agenda Setting in a 2. 0 WorldThomas J. Johnson · 2013
• 📕Leisure CommonsPayal Arora · 2014
• Programming Collective IntelligenceToby Segaran · 2007
• Web 2.0 HeroesBradley L. Jones · 2008
• 📕Enterprise 2.0Tracy L. Tuten · 2010
• Enterprise 2.0Niall Cook · 2008
• Enterprise Web 2.0 fundamentalsKrishna Sankar · 2009
• Enterprise Web 2.0 with EGLBen Margolis · 2009

Ranked by number of editions on Open Library, a rough measure of how lasting a book is.

🔗 Related topics

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• World Wide Web The World Wide Web (also known as WWW, W3, or simply the Web) is a global interconnected information system that enables content sharing over the Internet…
• Morfik Morfik Technology Pty Ltd. is an Australian software company that was acquired by Altium in 2010. The company is known for developing a set of visual designers…
• News aggregator In computing, a news aggregator, also termed a feed aggregator, content aggregator, feed reader, news reader, or simply an aggregator, is client software…
• Website A website, occasionally written as web site, and sometimes contextually shortened to just site, is the set of one or more web pages published under a common…
• Web template system A web template system in web publishing allows web designers and developers to work with web templates to automatically generate custom web pages, such…
• Cross-site scripting Cross-site scripting (XSS) is a type of security vulnerability that can be found in some web applications. XSS attacks enable attackers to inject client-side…
• Google Developers Google Developers (previously Google Code) is Google's site for software development tools and platforms[update], application programming interfaces (APIs)…