Everything about Sequence profiling tool
A sequence profiling tool in bioinformatics is a type of software that presents information related to a genetic sequence, gene name, or keyword input. Such tools generally take a query such as a DNA, RNA, or protein sequence or ‘keyword’ and search one or more databases for information related to that sequence. Summaries and aggregate results are provided in standardized format describing the information that would otherwise have required visits to many smaller sites or direct literature searches to compile. Many sequence profiling tools are software portals or gateways that simplify the process of finding information about a query in the large and growing number of bioinformatics databases. The access to these kinds of tools is either web based or locally downloadable executables. Wikipedia →
🧭 Start here: a 6-step reading path
- Read the overview: Sequence profiling toolA 5-minute orientation
- Pick up a classic book: Learning PythonThe most-reprinted book on the subject
- Read the landmark paper: RNA Sequencing: A Potent Transcription Profiling ToolCited 1 times
- Go sideways: BioJavaA closely related topic
- Go sideways: BLAT (bioinformatics)A closely related topic
📖 Definitions
No dictionary entry for this exact phrase.
🗂️ The subject at a glance
🏆 Landmark papers (most cited)
📚 Books worth reading
Learning PythonMark Lutz, David Ascher · 1999
Technical CommunicationJohn M. Lannon · 2000
Operations ManagementRoberta S. Russell, Bernard Taylor · 1998
Bioinformatics Research and ApplicationsZhipeng Cai · 2013
Terrorist recognition handbookMalcolm W. Nance · 2008
Computational intelligence and pattern analysis in biology informaticsUjjwal Maulik · 2010
Gene discovery for disease modelsWeikuan Gu · 2011- 📕Human Factors MethodsNeville A. Stanton · 2017
Ranked by number of editions on Open Library, a rough measure of how lasting a book is.
🔗 Related topics
- BioJava BioJava is an open-source software project dedicated to providing Java tools for processing biological data. BioJava is a set of library functions written…
- BLAT (bioinformatics) BLAT (BLAST-like alignment tool) is a pairwise sequence alignment algorithm that was developed by Jim Kent at the University of California Santa Cruz (UCSC)…
- Sequerome Sequerome is a web-based sequence profiling tool for integrating the results of a BLAST sequence-alignment report with external research tools and servers…
- GeneCards GeneCards is a database of human genes that provides genomic, proteomic, transcriptomic, genetic and functional information on all known and predicted…
- National Center for Biotechnology Information The National Center for Biotechnology Information (NCBI) is part of the National Library of Medicine (NLM), a branch of the National Institutes of Health…
- UGENE UGENE is computer software for bioinformatics. It helps biologists to analyze various biological genetics data, such as sequences, annotations, multiple…
- Sequence alignment In bioinformatics, a sequence alignment is a way of arranging the sequences of DNA, RNA, or protein to identify regions of similarity that may be a consequence…
- HH-suite The HH-suite is an open-source software package for sensitive protein sequence searching. It contains programs that can search for similar protein sequences…