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Everything about Probalign

Probalign is a sequence alignment tool that calculates a maximum expected accuracy alignment using partition function posterior probabilities. Base pair probabilities are estimated using an estimate similar to the Boltzmann distribution. The partition function is calculated using a dynamic programming approach. Wikipedia →

đź§­ Start here: a 6-step reading path

  1. Read the overview: ProbalignA 5-minute orientation
  2. Pick up a classic book: Multiple sequence alignment methodsThe most-reprinted book on the subject
  3. Read the landmark paper: Probalign: multiple sequence alignment using partition function posterior probabilitiesCited 196 times
  4. Go sideways: Rayleigh distributionA closely related topic
  5. Go sideways: Metric connectionA closely related topic

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🗂️ The subject at a glance

  1. Algorithm

🏆 Landmark papers (most cited)

📚 Books worth reading

Ranked by number of editions on Open Library, a rough measure of how lasting a book is.

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