Everything about High-throughput computing

🧭 Start here: a 6-step reading path

1. Read the overview: High-throughput computingA 5-minute orientation
2. Skim a recent paper: High‐Throughput Computing Guided Low/High Index Optical Coupling Layer for Record‐Performance Semitransparent Organic Solar CellsInfluential work since 2022
3. Pick up a classic book: Bioinformatics and drug discoveryThe most-reprinted book on the subject
4. Read the landmark paper: GROMACS: High performance molecular simulations through multi-level parallelism from laptops to supercomputersCited 27,390 times
5. Go sideways: Many-task computingA closely related topic
6. Go sideways: HTCondorA closely related topic

🏆 Landmark papers (most cited)

• GROMACS: High performance molecular simulations through multi-level parallelism from laptops to supercomputers

  Mark James Abraham, Teemu Murtola, Roland Schulz · 2015 · SoftwareX · 27,390 citations

• VASPKIT: A user-friendly interface facilitating high-throughput computing and analysis using VASP code

  Vei Wang, Nan Xu, Jin-Cheng Liu · 2021 · Computer Physics Communications · 8,107 citations

• Transparent conducting materials discovery using high-throughput computing

  Guillaume Brunin, Francesco Ricci, Viet-Anh Ha · 2019 · npj Computational Materials · 185 citations

• High-Throughput All-Atom Molecular Dynamics Simulations Using Distributed Computing

  I. Buch, M. J. Harvey, T. Giorgino · 2010 · Journal of Chemical Information and Modeling · 180 citations

• Eoulsan: a cloud computing-based framework facilitating high throughput sequencing analyses

  Laurent Jourdren, Maria Bernard, Marie-Agnès Dillies · 2012 · Bioinformatics · 175 citations

• FPGA-Based High-Throughput CNN Hardware Accelerator With High Computing Resource Utilization Ratio

  Wenjin Huang, Huangtao Wu, Qingkun Chen · 2022 · IEEE Transactions on Neural Networks and Learning Systems · 111 citations

• High throughput computing based distributed genetic algorithm for building energy consumption optimization

  Chunfeng Yang, Haijiang Li, Yacine Rezgui · 2014 · Energy and Buildings · 67 citations

• High-Performance Throughput Computing

  S. Chaudhry, P. Caprioli, S. Yip · 2005 · IEEE Micro · 65 citations

🆕 Influential since 2022

• High‐Throughput Computing Guided Low/High Index Optical Coupling Layer for Record‐Performance Semitransparent Organic Solar Cells

  Tao Xu, Baozhong Deng, Yanglin Zhao · 2023 · Advanced Energy Materials · 40 citations

• A High Throughput In-MRAM-Computing Scheme Using Hybrid p-SOT-MTJ/GAA-CNTFET

  Zhongzhen Tong, Yilin Xu, Yunlong Liu · 2024 · IEEE Transactions on Circuits and Systems I: Regular Papers · 30 citations

• High-throughput computing for hydrogen transport properties in ε-ZrH2

  Hua Hou, Yue Pan, Guoning Bai · 2022 · Advanced Composites and Hybrid Materials · 27 citations

• Edge computing at sea: high-throughput classification of in-situ plankton imagery for adaptive sampling

  Moritz S. Schmid, Dominic Daprano, Malhar M. Damle · 2023 · Frontiers in Marine Science · 17 citations

• State of the Art: High-Performance and High-Throughput Computing for Remote Sensing Big Data

  Sheng Zhang, Yong Xue, Xiran Zhou · 2022 · IEEE Geoscience and Remote Sensing Magazine · 16 citations

📚 Books worth reading

• 📕Bioinformatics and drug discoveryRichard S. Larson · 2005
• Virtual screeningChristoph Sotriffer · 2011
• Virtual screeningGerhard Klebe · 2000
• Chemoinformatics approaches to virtual screeningJohnson, Stephen R. · 2008
• Virtual screeningMutasem Omar Taha · 2012
• Bioinformatics and Drug DiscoveryRichard S. Larson · 2005
• Bioinformatics and drug discoveryRichard S. Larson · 2005
• 📕Methods and techniques in drug discovery · 2005

Ranked by number of editions on Open Library, a rough measure of how lasting a book is.

🔗 Related topics

• Many-task computing Many-task computing (MTC)[excessive citations] in computational science is an approach to parallel computing that aims to bridge the gap between two computing…
• HTCondor HTCondor is an open-source high-throughput computing software framework for coarse-grained distributed parallelization of computationally intensive tasks…
• Techila Grid The Techila Distributed Computing Engine (earlier known as Techila Grid) is a commercial grid computing software product. Techila Distributed Computing…
• Miron Livny Miron Livny (Hebrew: מירון לבני) is a senior researcher and professor specializing in distributed computing at the University of Wisconsin–Madison. Livny…
• High-performance computing High-performance computing (HPC) is the use of supercomputers and computer clusters to solve advanced problems. HPC integrates systems administration (including…
• Grid computing Grid computing is the use of widely distributed computer resources to reach a common goal. A computing grid can be thought of as a distributed system with…
• Supercomputer A supercomputer is a type of computer with a high level of performance as compared to a general-purpose computer. Supercomputers play an important role…
• UNICORE UNICORE (UNiform Interface to COmputing REsources) is a grid computing technology for resources such as supercomputers or cluster systems and information…